Index

_

__init__() (mercurial.BranchAlignment method) (mercurial.branches.alignment.BranchAlignment method) (mercurial.branches.branch.RealityBranch method) (mercurial.branches.decoherence.DecoherenceMeasure method) (mercurial.consciousness.biasing.TopDownBiasing method) (mercurial.core.coupled_fields.CoupledNeuralFields method) (mercurial.core.fdtd.FDTD2D method) (mercurial.core.neural_field.MexicanHatKernel method) (mercurial.core.neural_field.NeuralField2D method) (mercurial.core.pattern_completion.HopfieldPatternCompletion method) (mercurial.core.plasticity.PlasticWilsonCowan method) (mercurial.core.qft_propagation.Dirac1D method) (mercurial.core.qft_propagation.KleinGordon2D method) (mercurial.core.thermodynamics.FullFreeEnergy method) (mercurial.core.wilson_cowan.WilsonCowanPopulation method) (mercurial.hierarchy.coupling.LevelCoupling method) (mercurial.spectral.binding.CrossModalBinding method) (mercurial.spectral.modalities.ModalityEnergyHierarchy method) (mercurial.spectral.perception.BayesianPerception method) (mercurial.utils.sensitivity.SobolSensitivity method)

A

A (mercurial.params.empirical.JansenRitParams attribute) a (mercurial.params.empirical.JansenRitParams attribute) A_e (mercurial.params.empirical.NeuralFieldParams attribute) a_e (mercurial.params.empirical.WilsonCowanParams attribute) A_i (mercurial.params.empirical.NeuralFieldParams attribute) a_i (mercurial.params.empirical.WilsonCowanParams attribute) activation_sequence() (mercurial.spectral.sequencing.TemporalSequencing method) activation_time() (mercurial.spectral.modalities.ModalityEnergyHierarchy method) add_branch() (mercurial.simulation.engine.SimulationEngine method) add_neural_branch() (mercurial.simulation.engine.SimulationEngine method) add_tag() (mercurial.spectral.binding.CrossModalBinding method) AFFECTIVE (mercurial.spectral.modalities.Modality attribute) (mercurial.spectral.quantum_fields.ModalityField attribute) AGENCY (mercurial.spectral.modalities.Modality attribute) AIR (mercurial.impressions.material_memory.Material attribute) alignment_dynamics() (mercurial.BranchAlignment method) (mercurial.branches.alignment.BranchAlignment method) alignment_probability() (mercurial.BranchAlignment method) (mercurial.branches.alignment.BranchAlignment method) AlignmentEvent (class in mercurial.branches.alignment)

alpha_active (mercurial.params.empirical.HopfParams attribute) alpha_adapt (mercurial.params.empirical.PhotoreceptorParams attribute) alpha_rest (mercurial.params.empirical.HopfParams attribute) alpha_wake_sleep() (in module mercurial.tests.enhancements.test_hopf) amplify_modality() (mercurial.impressions.material_memory.CompositeMaterial method) (mercurial.impressions.material_memory.MaterialMemory method) analyze() (mercurial.utils.sensitivity.SobolSensitivity method) apply_biasing() (mercurial.consciousness.biasing.TopDownBiasing method) apply_coupling() (mercurial.spectral.binding.CrossModalBinding method) apply_empirical_parameters() (mercurial.simulation.engine.SimulationEngine method) apply_mapping() (mercurial.branches.isomorphism.IsomorphismMapper method) apply_transition() (mercurial.hierarchy.transition.LevelTransitionOperator method) atol (mercurial.simulation.integrator.IntegrationConfig attribute) AttentionFocus (class in mercurial.impressions.dynamic_formation) attractor_basin (mercurial.core.patterns.StabilityRegime attribute) (mercurial.StabilityRegime attribute) AUDITORY (mercurial.spectral.modalities.Modality attribute) (mercurial.spectral.quantum_fields.ModalityField attribute) auditory_stimulus() (in module mercurial.tests.enhancements.test_coupled_fields) AuditoryTransductionPipeline (class in mercurial.core.sensory_transduction)

B

B (mercurial.params.empirical.JansenRitParams attribute) b (mercurial.params.empirical.JansenRitParams attribute) base_efficiency (mercurial.spectral.dpr_pathways.DPRConfig attribute) baseline_latency (mercurial.spectral.modalities.ModalitySpec attribute) basis (mercurial.core.state_space.HilbertSpace attribute) (mercurial.HilbertSpace attribute) BayesianPerception (class in mercurial.spectral.perception) beta (mercurial.params.empirical.HopfParams attribute) beta_rep (mercurial.params.empirical.ImpressionParams attribute) BifurcationPoint (class in mercurial.branches.formation)

binding_strength() (mercurial.spectral.binding.CrossModalBinding method) BindingTag (class in mercurial.spectral.binding) BipolarCell (class in mercurial.core.sensory_transduction) bootstrap_confidence_intervals() (in module mercurial.utils.validation) branch_a (mercurial.branches.alignment.AlignmentEvent attribute) branch_b (mercurial.branches.alignment.AlignmentEvent attribute) BranchAlignment (class in mercurial) (class in mercurial.branches.alignment) BranchDecoherenceDynamics (class in mercurial.branches.decoherence) BranchFormationSimulator (class in mercurial.branches.formation)

C

C (mercurial.params.empirical.JansenRitParams attribute) C1 (mercurial.params.empirical.JansenRitParams attribute) C2 (mercurial.params.empirical.JansenRitParams attribute) C3 (mercurial.params.empirical.JansenRitParams attribute) C4 (mercurial.params.empirical.JansenRitParams attribute) CHRONOCEPTIVE (mercurial.spectral.modalities.Modality attribute) (mercurial.spectral.quantum_fields.ModalityField attribute) circle_constraint() (in module mercurial.tests.foundations.test_pattern) clamped_derivative() (mercurial.core.wilson_cowan.WilsonCowanPopulation method) classify() (mercurial.hierarchy.complexity.LevelClassifier class method) clear_output() (mercurial.utils.launcher.ScriptLauncher method) coherence() (mercurial.core.patterns.NeuralPattern method) (mercurial.core.patterns.Pattern method) (mercurial.Pattern method) coherence_length (mercurial.params.empirical.EntanglementParams attribute) coherence_requirement (mercurial.spectral.dpr_pathways.DPRConfig attribute) complexity() (mercurial.core.patterns.Pattern method) (mercurial.Pattern method) complexity_measure() (mercurial.hierarchy.levels.LadderHierarchy method) ComplexityMeasure (class in mercurial.hierarchy.complexity) CompositeMaterial (class in mercurial.impressions.material_memory) compute() (mercurial.core.entropy.GeneralizedEntropy method) (mercurial.core.thermodynamics.FullFreeEnergy method) (mercurial.hierarchy.complexity.ComplexityMeasure method) compute_biasing_field() (mercurial.consciousness.biasing.TopDownBiasing method) compute_entanglement() (mercurial.simulation.engine.SimulationEngine method) compute_entropy() (mercurial.branches.branch.RealityBranch method) compute_external_input() (mercurial.consciousness.biasing.TopDownBiasing method) compute_feature_matrix() (mercurial.branches.isomorphism.IsomorphismMapper method) compute_manifestations() (mercurial.simulation.engine.SimulationEngine method) compute_neural_bias() (mercurial.consciousness.biasing.TopDownBiasing method) compute_order_parameter() (mercurial.branches.formation.SymmetryBreaking method) compute_orthogonality() (mercurial.branches.branch.RealityBranch method)

compute_pattern_complexity() (mercurial.utils.synthetic_data.OverfittingTest method) compute_transfer() (mercurial.BranchAlignment method) (mercurial.branches.alignment.BranchAlignment method) concurrence_mixed() (in module mercurial.core.entanglement) concurrence_pure() (in module mercurial.core.entanglement) constraint_energy() (mercurial.core.thermodynamics.InternalEnergy static method) constraint_propagation() (mercurial.hierarchy.transition.LevelTransitionOperator method) Constraints (class in mercurial) (class in mercurial.core.patterns) contains() (mercurial.hierarchy.levels.HierarchicalLevel method) copy() (mercurial.core.state_space.StateVector method) (mercurial.StateVector method) correlation() (mercurial.core.qft_propagation.KleinGordon2D method) CoupledNeuralFields (class in mercurial.core.coupled_fields) coupling_coefficient (mercurial.spectral.modalities.ModalitySpec attribute) (mercurial.spectral.quantum_fields.FieldSpec attribute) coupling_envelope() (mercurial.branches.alignment.AlignmentEvent method) coupling_matrix() (mercurial.hierarchy.coupling.LevelCoupling method) coupling_moderate (mercurial.params.empirical.KuramotoParams attribute) coupling_strength (mercurial.branches.alignment.AlignmentEvent attribute) coupling_strength() (mercurial.hierarchy.coupling.LevelCoupling method) coupling_strong (mercurial.params.empirical.KuramotoParams attribute) coupling_weak (mercurial.params.empirical.KuramotoParams attribute) courant_factor (mercurial.params.empirical.QFTParams attribute) create_default_problem() (in module mercurial.utils.sensitivity) create_initial_branch() (mercurial.branches.formation.BranchFormationSimulator method) create_neural_branch() (mercurial.simulation.engine.SimulationEngine method) create_percept() (mercurial.spectral.binding.CrossModalBinding method) critical_state (mercurial.branches.formation.BifurcationPoint attribute) CROSS_BRANCH_ISOMORPHISM (mercurial.spectral.dpr_pathways.DPRPathway attribute) CrossModalBinding (class in mercurial.spectral.binding) CrossValidator (class in mercurial.utils.validation) current() (mercurial.core.qft_propagation.Dirac1D method)

D

decay (mercurial.params.empirical.HebbianParams attribute) decay_exponent (mercurial.impressions.material_memory.MaterialSpec attribute) decay_factor() (mercurial.impressions.material_memory.MaterialMemory method) decay_rate (mercurial.core.patterns.StabilityRegime attribute) (mercurial.params.empirical.PatternFormationParams attribute) (mercurial.StabilityRegime attribute) decay_rate() (mercurial.impressions.persistence.ImpressionDynamics method) decoherence_rate() (mercurial.branches.decoherence.DecoherenceMeasure method) decoherence_sensitivity (mercurial.spectral.dpr_pathways.DPRConfig attribute) decoherence_time() (mercurial.branches.decoherence.DecoherenceMeasure method) DecoherenceMeasure (class in mercurial.branches.decoherence) DecoherenceParams (class in mercurial.params.empirical) derivative() (mercurial.core.hopf.HopfOscillator method) (mercurial.core.jansen_rit.JansenRitColumn method) (mercurial.core.plasticity.PlasticJansenRit method) (mercurial.core.wilson_cowan.WilsonCowanPopulation method) descriptive_incommensurability() (mercurial.hierarchy.emergence.EmergenceDetector method)

detect() (mercurial.spectral.perception.BayesianPerception method) detection_threshold() (mercurial.spectral.perception.BayesianPerception method) diff_ratio (mercurial.params.empirical.PatternFormationParams attribute) dimension (mercurial.core.state_space.HilbertSpace attribute) (mercurial.HilbertSpace attribute) Dirac1D (class in mercurial.core.qft_propagation) distance() (mercurial.core.state_space.HilbertSpace method) (mercurial.HilbertSpace method) dominant_modality() (mercurial.spectral.modalities.ModalityEnergyHierarchy method) DPR (mercurial.spectral.modalities.Modality attribute) dpr_perception() (mercurial.spectral.perception.BayesianPerception method) DPRConfig (class in mercurial.spectral.dpr_pathways) DPRPathway (class in mercurial.spectral.dpr_pathways) DPRPathwayOptimizer (class in mercurial.spectral.dpr_pathways) duration (mercurial.branches.alignment.AlignmentEvent attribute) dx (mercurial.params.empirical.NeuralFieldParams attribute) (mercurial.params.empirical.QFTParams attribute) DynamicImpressionFormation (class in mercurial.impressions.dynamic_formation)

E

e0 (mercurial.params.empirical.JansenRitParams attribute) EarlyStopping (class in mercurial.utils.overfitting_controls) (class in mercurial.utils.validation) effective_dof() (mercurial.hierarchy.complexity.ComplexityMeasure method) effective_similarity() (mercurial.hierarchy.coupling.LevelCoupling method) EffectiveTemperature (class in mercurial.core.thermodynamics) ELECTROCEPTIVE (mercurial.spectral.modalities.Modality attribute) EmergenceDetector (class in mercurial.hierarchy.emergence) EmotionalSalience (class in mercurial.impressions.dynamic_formation) energy_density() (mercurial.core.qft_propagation.KleinGordon2D method) energy_threshold (mercurial.spectral.dpr_pathways.DPRConfig attribute) enforce_range() (mercurial.consciousness.biasing.TopDownBiasing method) EntanglementParams (class in mercurial.params.empirical) eps_r_gray (mercurial.params.empirical.FDTDParams attribute) eps_r_white (mercurial.params.empirical.FDTDParams attribute) equality (mercurial.Constraints attribute) (mercurial.core.patterns.Constraints attribute) eta (mercurial.params.empirical.ThermodynamicParams attribute)

eta_LTP (mercurial.params.empirical.ImpressionParams attribute) eta_STP (mercurial.params.empirical.ImpressionParams attribute) evaluate() (mercurial.Constraints method) (mercurial.core.patterns.Constraints method) evaluate_model() (mercurial.utils.sensitivity.SobolSensitivity method) evaluate_pathway() (mercurial.spectral.dpr_pathways.DPRPathwayOptimizer method) evaluate_prediction() (mercurial.utils.synthetic_data.OverfittingTest method) evolve() (mercurial.core.patterns.NeuralPattern method) (mercurial.core.wilson_cowan.WilsonCowanPopulation method) (mercurial.spectral.quantum_fields.QuantumFieldOperator method) evolve_all() (mercurial.spectral.quantum_fields.UnifiedField method) evolve_branch_state() (mercurial.branches.decoherence.BranchDecoherenceDynamics method) evolve_impression() (mercurial.impressions.persistence.ImpressionDynamics method) evolve_pair() (mercurial.branches.decoherence.BranchDecoherenceDynamics method) evolve_pattern_trajectory() (in module mercurial.core.dynamics) evolve_to_bifurcation() (mercurial.branches.formation.SymmetryBreaking method) example_model() (in module mercurial.utils.sensitivity) excitation_amplitude() (mercurial.spectral.quantum_fields.QuantumFieldOperator method) execute_script() (mercurial.utils.launcher.ScriptLauncher method)

F

FDTD2D (class in mercurial.core.fdtd) FDTDParams (class in mercurial.params.empirical) FIELD_DIRECT_ACCESS (mercurial.spectral.dpr_pathways.DPRPathway attribute) field_strength() (mercurial.spectral.quantum_fields.QuantumFieldOperator method) field_type (mercurial.spectral.quantum_fields.FieldSpec attribute) FieldSpec (class in mercurial.spectral.quantum_fields) filter_scripts() (mercurial.utils.launcher.ScriptLauncher method) find_optimal_mapping() (mercurial.branches.isomorphism.IsomorphismMapper method) first_modality() (mercurial.spectral.sequencing.TemporalSequencing method) formation_rate() (mercurial.impressions.persistence.ImpressionDynamics method)

free_energy() (mercurial.consciousness.perception.VariationalPerception method) (mercurial.core.patterns.Pattern method) (mercurial.Pattern method) (mercurial.spectral.perception.BayesianPerception method) free_energy_gradient() (in module mercurial.core.dynamics) frequency (mercurial.params.empirical.FDTDParams attribute) (mercurial.spectral.binding.BindingTag attribute) frequency_max (mercurial.spectral.quantum_fields.FieldSpec attribute) frequency_min (mercurial.spectral.quantum_fields.FieldSpec attribute) from_pattern() (mercurial.core.entropy.GeneralizedEntropy method) FullFreeEnergy (class in mercurial.core.thermodynamics)

G

g_max (mercurial.params.empirical.HairCellParams attribute) gamma0 (mercurial.params.empirical.ThermodynamicParams attribute) gamma_dec0 (mercurial.params.empirical.DecoherenceParams attribute) gamma_forget (mercurial.params.empirical.ImpressionParams attribute) gaussian_phi() (in module mercurial.tests.enhancements.test_qft) gaussian_source() (in module mercurial.tests.enhancements.test_fdtd) gaussian_stimulus() (in module mercurial.tests.enhancements.test_neural_field) generalized_entropy() (mercurial.core.thermodynamics.FullFreeEnergy method) GeneralizedEntropy (class in mercurial.core.entropy) generate_dataset() (mercurial.utils.synthetic_data.SyntheticDataGenerator method) generate_new_branch_states() (mercurial.branches.formation.SymmetryBreaking method) generate_pattern() (mercurial.utils.synthetic_data.SyntheticDataGenerator method) generate_permuted_scores() (in module mercurial.utils.validation) get_all_parameters() (in module mercurial.params.empirical) get_all_scripts_in_node() (mercurial.utils.launcher.ScriptLauncher method) get_amplitude() (mercurial.core.hopf.HopfOscillator method) get_EEG() (mercurial.core.jansen_rit.JansenRitColumn method) (mercurial.core.plasticity.PlasticJansenRit method) get_EEG_array() (mercurial.core.jansen_rit.JansenRitNetwork method) get_external_inputs() (mercurial.core.patterns.NeuralPattern method) get_field_strengths() (mercurial.spectral.quantum_fields.UnifiedField method)

get_ft() (mercurial.core.neural_field.MexicanHatKernel method) get_intensity() (mercurial.core.fdtd.FDTD2D method) get_kernel() (mercurial.core.neural_field.MexicanHatKernel method) get_level() (mercurial.hierarchy.levels.LadderHierarchy method) get_level_range() (mercurial.hierarchy.complexity.LevelClassifier class method) get_mean_amplitude() (mercurial.core.hopf.HopfNetwork method) get_mean_EEG() (mercurial.core.jansen_rit.JansenRitNetwork method) get_order_parameter() (mercurial.core.hopf.HopfNetwork method) get_order_parameters() (mercurial.core.coupled_fields.CoupledNeuralFields method) get_overlap() (mercurial.core.pattern_completion.HopfieldPatternCompletion method) get_phase() (mercurial.core.hopf.HopfOscillator method) get_phase_field() (mercurial.core.neural_field.NeuralField2D method) get_retention_percentage() (mercurial.impressions.material_memory.MaterialMemory method) get_top_parameters() (mercurial.utils.sensitivity.SobolSensitivity method) get_weights() (mercurial.core.plasticity.PlasticWilsonCowan method) gradient() (mercurial.utils.overfitting_controls.L2Regularizer method) (mercurial.utils.overfitting_controls.LinearModel method) (mercurial.utils.validation.Regularization method) growth_param (mercurial.params.empirical.PatternFormationParams attribute) GUSTATORY (mercurial.spectral.modalities.Modality attribute) (mercurial.spectral.quantum_fields.ModalityField attribute)

H

HairCell (class in mercurial.core.sensory_transduction) HairCellParams (class in mercurial.params.empirical) HebbianParams (class in mercurial.params.empirical) hide_tip() (mercurial.utils.launcher.ToolTip method) HierarchicalLevel (class in mercurial.hierarchy.levels)

HilbertSpace (class in mercurial) (class in mercurial.core.state_space) HopfieldPatternCompletion (class in mercurial.core.pattern_completion) HopfNetwork (class in mercurial.core.hopf) HopfOscillator (class in mercurial.core.hopf) HopfParams (class in mercurial.params.empirical)

I

I50 (mercurial.params.empirical.PhotoreceptorParams attribute) IDEButton (class in mercurial.utils.launcher) ImpressionDynamics (class in mercurial.impressions.persistence) ImpressionParams (class in mercurial.params.empirical) inequality (mercurial.Constraints attribute) (mercurial.core.patterns.Constraints attribute) infer_hidden_state() (mercurial.consciousness.perception.VariationalPerception method) (mercurial.spectral.perception.BayesianPerception method) information_content() (mercurial.core.patterns.NeuralPattern method) (mercurial.core.patterns.Pattern method) (mercurial.Pattern method) inner_product() (mercurial.core.state_space.HilbertSpace method) (mercurial.HilbertSpace method) integrate() (mercurial.simulation.integrator.StochasticIntegrator method)

integrate_fixed_step() (mercurial.simulation.integrator.StochasticIntegrator method) integrated_information() (mercurial.hierarchy.complexity.ComplexityMeasure method) IntegrationConfig (class in mercurial.simulation.integrator) InternalEnergy (class in mercurial.core.thermodynamics) INTEROCEPTIVE (mercurial.spectral.modalities.Modality attribute) (mercurial.spectral.quantum_fields.ModalityField attribute) IRON (mercurial.impressions.material_memory.Material attribute) is_attractor() (mercurial.core.patterns.StabilityRegime method) (mercurial.StabilityRegime method) is_decohered() (mercurial.branches.decoherence.DecoherenceMeasure method) is_emergent() (mercurial.hierarchy.emergence.EmergenceDetector method) is_instability_condition() (mercurial.branches.formation.SymmetryBreaking method) is_isomorphic() (mercurial.branches.isomorphism.IsomorphismMapper method) IsomorphismMapper (class in mercurial.branches.isomorphism)

J

JansenRitColumn (class in mercurial.core.jansen_rit)

JansenRitNetwork (class in mercurial.core.jansen_rit) JansenRitParams (class in mercurial.params.empirical)

K

K0 (mercurial.params.empirical.LadderCouplingParams attribute) k_eff (mercurial.params.empirical.ThermodynamicParams attribute) kappa_emo (mercurial.params.empirical.ImpressionParams attribute) kappa_env (mercurial.params.empirical.DecoherenceParams attribute) kill_script() (mercurial.utils.launcher.ScriptLauncher method)

kinetic_energy() (mercurial.core.thermodynamics.InternalEnergy static method) KleinGordon2D (class in mercurial.core.qft_propagation) KuramotoNetwork (class in mercurial.core.kuramoto) KuramotoOscillator (class in mercurial.core.kuramoto) KuramotoParams (class in mercurial.params.empirical)

L

L2Regularizer (class in mercurial.utils.overfitting_controls) l_decay (mercurial.params.empirical.LadderCouplingParams attribute) L_max (mercurial.params.empirical.LadderCouplingParams attribute) L_min (mercurial.params.empirical.LadderCouplingParams attribute) LABELS (mercurial.hierarchy.levels.LadderHierarchy attribute) LadderCouplingParams (class in mercurial.params.empirical) LadderHierarchy (class in mercurial.hierarchy.levels) laplacian() (mercurial.core.qft_propagation.KleinGordon2D method) learning_curve_analysis() (in module mercurial.utils.validation) learning_rate (mercurial.params.empirical.HebbianParams attribute) (mercurial.params.empirical.PatternCompletionParams attribute) level() (mercurial.core.patterns.Pattern method) (mercurial.Pattern method)

LEVEL_NAMES (mercurial.hierarchy.complexity.LevelClassifier attribute) LEVEL_THRESHOLDS (mercurial.hierarchy.complexity.LevelClassifier attribute) LevelClassifier (class in mercurial.hierarchy.complexity) LevelCoupling (class in mercurial.hierarchy.coupling) LevelTransitionOperator (class in mercurial.hierarchy.transition) LIMESTONE (mercurial.impressions.material_memory.Material attribute) LinearModel (class in mercurial.utils.overfitting_controls) load_scripts() (mercurial.utils.launcher.ScriptLauncher method) log_energy_threshold (mercurial.spectral.modalities.ModalitySpec attribute) logarithmic_negativity_covariance() (in module mercurial.core.entanglement) loss() (mercurial.utils.overfitting_controls.LinearModel method) lyapunov_exponents (mercurial.core.patterns.StabilityRegime attribute) (mercurial.StabilityRegime attribute)

M

MAGNETOCEPTIVE (mercurial.spectral.modalities.Modality attribute) manifestation_probability() (mercurial.spectral.modalities.ModalityEnergyHierarchy method) (mercurial.spectral.quantum_fields.UnifiedField method) mass_dirac (mercurial.params.empirical.QFTParams attribute) mass_scalar (mercurial.params.empirical.QFTParams attribute) Material (class in mercurial.impressions.material_memory) MaterialMemory (class in mercurial.impressions.material_memory) MaterialSpec (class in mercurial.impressions.material_memory) max_step (mercurial.simulation.integrator.IntegrationConfig attribute) mean_field() (mercurial.core.kuramoto.KuramotoNetwork method) mercurial module mercurial.atlas module mercurial.atlas.cicoria_empirical module mercurial.atlas.enfield_poltergeist_empirical module mercurial.atlas.maria_shoe_empirical module mercurial.atlas.morton_ghost_empirical module mercurial.atlas.reynolds_nde_empirical module mercurial.atlas.sri_remote_viewing_empirical module mercurial.atlas.thornton_road_empirical module mercurial.atlas.wilmot_empirical module mercurial.branches module mercurial.branches.alignment module mercurial.branches.branch module mercurial.branches.decoherence module mercurial.branches.formation module mercurial.branches.isomorphism module mercurial.consciousness module mercurial.consciousness.biasing module mercurial.consciousness.perception module mercurial.core module mercurial.core.coupled_fields module mercurial.core.dynamics module mercurial.core.entanglement module mercurial.core.entropy module mercurial.core.fdtd module mercurial.core.hopf module mercurial.core.jansen_rit module mercurial.core.kuramoto module mercurial.core.neural_field module mercurial.core.pattern_completion module mercurial.core.patterns module mercurial.core.plasticity module mercurial.core.qft_propagation module mercurial.core.sensory_transduction module mercurial.core.state_space module mercurial.core.thermodynamics module mercurial.core.wilson_cowan module mercurial.hierarchy module mercurial.hierarchy.complexity module mercurial.hierarchy.coupling module mercurial.hierarchy.emergence module mercurial.hierarchy.levels module mercurial.hierarchy.transition module mercurial.impressions module mercurial.impressions.dynamic_formation module mercurial.impressions.material_memory module mercurial.impressions.persistence module mercurial.params module mercurial.params.empirical module mercurial.simulation module mercurial.simulation.engine module mercurial.simulation.integrator module mercurial.spectral module mercurial.spectral.binding module mercurial.spectral.dpr_pathways module mercurial.spectral.modalities module mercurial.spectral.perception module mercurial.spectral.quantum_fields module mercurial.spectral.sequencing module mercurial.tests module mercurial.tests.enhancements module mercurial.tests.enhancements.test_coupled_fields module mercurial.tests.enhancements.test_empirical_params module mercurial.tests.enhancements.test_entanglement module mercurial.tests.enhancements.test_fdtd module mercurial.tests.enhancements.test_full_integration module mercurial.tests.enhancements.test_hopf module mercurial.tests.enhancements.test_jansen_rit module mercurial.tests.enhancements.test_kuramoto module mercurial.tests.enhancements.test_neural_field module mercurial.tests.enhancements.test_pattern_completion module mercurial.tests.enhancements.test_plasticity module mercurial.tests.enhancements.test_qft module mercurial.tests.enhancements.test_sensory_transduction module mercurial.tests.enhancements.test_wilson_cowan module mercurial.tests.foundations module mercurial.tests.foundations.test_biasing module

mercurial.tests.foundations.test_binding module mercurial.tests.foundations.test_branch_formation module mercurial.tests.foundations.test_complexity module mercurial.tests.foundations.test_decoherence module mercurial.tests.foundations.test_dpr_pathways module mercurial.tests.foundations.test_emergence module mercurial.tests.foundations.test_free_energy module mercurial.tests.foundations.test_impression module mercurial.tests.foundations.test_isomorphism module mercurial.tests.foundations.test_level_coupling module mercurial.tests.foundations.test_material_memory module mercurial.tests.foundations.test_pattern module mercurial.tests.foundations.test_pattern_evolution module mercurial.tests.foundations.test_perception module mercurial.tests.foundations.test_persistence module mercurial.tests.foundations.test_quantum_fields module mercurial.tests.foundations.test_range_enforcement module mercurial.tests.foundations.test_spectral module mercurial.tests.foundations.test_transition module mercurial.utils module mercurial.utils.launcher module mercurial.utils.overfitting_controls module mercurial.utils.sensitivity module mercurial.utils.synthetic_data module mercurial.utils.validation module method (mercurial.simulation.integrator.IntegrationConfig attribute) MexicanHatKernel (class in mercurial.core.neural_field) modalities (mercurial.spectral.binding.BindingTag attribute) Modality (class in mercurial.spectral.modalities) modality (mercurial.spectral.quantum_fields.FieldSpec attribute) modality_affinities (mercurial.impressions.material_memory.MaterialSpec attribute) ModalityEnergyHierarchy (class in mercurial.spectral.modalities) ModalityField (class in mercurial.spectral.quantum_fields) ModalitySpec (class in mercurial.spectral.modalities) module mercurial mercurial.atlas mercurial.atlas.cicoria_empirical mercurial.atlas.enfield_poltergeist_empirical mercurial.atlas.maria_shoe_empirical mercurial.atlas.morton_ghost_empirical mercurial.atlas.reynolds_nde_empirical mercurial.atlas.sri_remote_viewing_empirical mercurial.atlas.thornton_road_empirical mercurial.atlas.wilmot_empirical mercurial.branches mercurial.branches.alignment mercurial.branches.branch mercurial.branches.decoherence mercurial.branches.formation mercurial.branches.isomorphism mercurial.consciousness mercurial.consciousness.biasing mercurial.consciousness.perception mercurial.core mercurial.core.coupled_fields mercurial.core.dynamics mercurial.core.entanglement mercurial.core.entropy mercurial.core.fdtd mercurial.core.hopf mercurial.core.jansen_rit mercurial.core.kuramoto mercurial.core.neural_field mercurial.core.pattern_completion mercurial.core.patterns mercurial.core.plasticity mercurial.core.qft_propagation mercurial.core.sensory_transduction mercurial.core.state_space mercurial.core.thermodynamics mercurial.core.wilson_cowan mercurial.hierarchy mercurial.hierarchy.complexity mercurial.hierarchy.coupling mercurial.hierarchy.emergence mercurial.hierarchy.levels mercurial.hierarchy.transition mercurial.impressions mercurial.impressions.dynamic_formation mercurial.impressions.material_memory mercurial.impressions.persistence mercurial.params mercurial.params.empirical mercurial.simulation mercurial.simulation.engine mercurial.simulation.integrator mercurial.spectral mercurial.spectral.binding mercurial.spectral.dpr_pathways mercurial.spectral.modalities mercurial.spectral.perception mercurial.spectral.quantum_fields mercurial.spectral.sequencing mercurial.tests mercurial.tests.enhancements mercurial.tests.enhancements.test_coupled_fields mercurial.tests.enhancements.test_empirical_params mercurial.tests.enhancements.test_entanglement mercurial.tests.enhancements.test_fdtd mercurial.tests.enhancements.test_full_integration mercurial.tests.enhancements.test_hopf mercurial.tests.enhancements.test_jansen_rit mercurial.tests.enhancements.test_kuramoto mercurial.tests.enhancements.test_neural_field mercurial.tests.enhancements.test_pattern_completion mercurial.tests.enhancements.test_plasticity mercurial.tests.enhancements.test_qft mercurial.tests.enhancements.test_sensory_transduction mercurial.tests.enhancements.test_wilson_cowan mercurial.tests.foundations mercurial.tests.foundations.test_biasing mercurial.tests.foundations.test_binding mercurial.tests.foundations.test_branch_formation mercurial.tests.foundations.test_complexity mercurial.tests.foundations.test_decoherence mercurial.tests.foundations.test_dpr_pathways mercurial.tests.foundations.test_emergence mercurial.tests.foundations.test_free_energy mercurial.tests.foundations.test_impression mercurial.tests.foundations.test_isomorphism mercurial.tests.foundations.test_level_coupling mercurial.tests.foundations.test_material_memory mercurial.tests.foundations.test_pattern mercurial.tests.foundations.test_pattern_evolution mercurial.tests.foundations.test_perception mercurial.tests.foundations.test_persistence mercurial.tests.foundations.test_quantum_fields mercurial.tests.foundations.test_range_enforcement mercurial.tests.foundations.test_spectral mercurial.tests.foundations.test_transition mercurial.utils mercurial.utils.launcher mercurial.utils.overfitting_controls mercurial.utils.sensitivity mercurial.utils.synthetic_data mercurial.utils.validation mu_e (mercurial.params.empirical.WilsonCowanParams attribute) mu_i (mercurial.params.empirical.WilsonCowanParams attribute)

N

n (mercurial.params.empirical.PhotoreceptorParams attribute) n_glomeruli (mercurial.params.empirical.PatternCompletionParams attribute) n_mitral_cells (mercurial.params.empirical.PatternCompletionParams attribute) n_piriform_neurons (mercurial.params.empirical.PatternCompletionParams attribute) name (mercurial.impressions.material_memory.MaterialSpec attribute) (mercurial.spectral.modalities.ModalitySpec attribute) neural_complexity() (mercurial.hierarchy.complexity.LevelClassifier method) NeuralField2D (class in mercurial.core.neural_field) NeuralFieldParams (class in mercurial.params.empirical) NeuralPattern (class in mercurial.core.patterns)

new_branch_seed (mercurial.branches.formation.BifurcationPoint attribute) NOCICEPTIVE (mercurial.spectral.modalities.Modality attribute) noise_amplitude (mercurial.simulation.integrator.IntegrationConfig attribute) norm() (mercurial.core.state_space.HilbertSpace method) (mercurial.core.state_space.StateVector method) (mercurial.HilbertSpace method) (mercurial.StateVector method) normalize() (mercurial.core.state_space.StateVector method) (mercurial.StateVector method) novel_causal_powers() (mercurial.hierarchy.emergence.EmergenceDetector method)

O

OLFACTORY (mercurial.spectral.modalities.Modality attribute) (mercurial.spectral.quantum_fields.ModalityField attribute) omega_alpha (mercurial.params.empirical.HopfParams attribute) omega_beta (mercurial.params.empirical.HopfParams attribute) omega_gamma (mercurial.params.empirical.HopfParams attribute) on_enter() (mercurial.utils.launcher.IDEButton method) on_leave() (mercurial.utils.launcher.IDEButton method) on_tree_select() (mercurial.utils.launcher.ScriptLauncher method)

open_probability() (mercurial.core.sensory_transduction.HairCell method) operational_closure() (mercurial.hierarchy.emergence.EmergenceDetector method) order_parameter() (mercurial.core.kuramoto.KuramotoNetwork method) (mercurial.core.neural_field.NeuralField2D method) organizational_entropy() (mercurial.hierarchy.complexity.ComplexityMeasure method) orthogonality() (mercurial.branches.decoherence.DecoherenceMeasure method) overall_impression_intensity() (mercurial.impressions.material_memory.CompositeMaterial method) OverfittingTest (class in mercurial.utils.synthetic_data) overlap() (mercurial.branches.decoherence.DecoherenceMeasure method)

P

partial_input() (in module mercurial.tests.enhancements.test_pattern_completion) pathway (mercurial.spectral.dpr_pathways.DPRConfig attribute) Pattern (class in mercurial) (class in mercurial.core.patterns) pattern_evolution_with_persistence() (in module mercurial.core.dynamics) pattern_evolution_with_thermodynamics() (in module mercurial.core.dynamics) pattern_sparsity (mercurial.params.empirical.PatternCompletionParams attribute) PatternCompletionParams (class in mercurial.params.empirical) PatternFormationParams (class in mercurial.params.empirical) penalty() (mercurial.utils.overfitting_controls.L2Regularizer method) (mercurial.utils.validation.Regularization method) permutation_test() (in module mercurial.utils.validation) persistence_probability() (mercurial.core.patterns.Pattern method) (mercurial.Pattern method) persistence_time() (mercurial.impressions.persistence.ImpressionDynamics method) phase (mercurial.spectral.binding.BindingTag attribute)

phase_noise (mercurial.params.empirical.KuramotoParams attribute) phenomenological_disorder() (in module mercurial.core.entropy) Photoreceptor (class in mercurial.core.sensory_transduction) PhotoreceptorParams (class in mercurial.params.empirical) PlasticJansenRit (class in mercurial.core.plasticity) PlasticWilsonCowan (class in mercurial.core.plasticity) position (mercurial.branches.alignment.AlignmentEvent attribute) positivity() (in module mercurial.tests.foundations.test_transition) potential_energy() (mercurial.core.thermodynamics.InternalEnergy static method) predict() (mercurial.utils.overfitting_controls.LinearModel method) probability_density() (mercurial.core.qft_propagation.Dirac1D method) project_to_level() (mercurial.hierarchy.transition.LevelTransitionOperator method) PROPRIOCEPTIVE (mercurial.spectral.modalities.Modality attribute) (mercurial.spectral.quantum_fields.ModalityField attribute) prune_parameters() (in module mercurial.utils.overfitting_controls) pulsed_input() (in module mercurial.tests.enhancements.test_jansen_rit)

Q

QFTParams (class in mercurial.params.empirical) QUANTUM_ENTANGLEMENT (mercurial.spectral.dpr_pathways.DPRPathway attribute)

QuantumFieldOperator (class in mercurial.spectral.quantum_fields) QUARTZ (mercurial.impressions.material_memory.Material attribute)

R

r (mercurial.params.empirical.JansenRitParams attribute) R_max (mercurial.params.empirical.PhotoreceptorParams attribute) reaction_rate (mercurial.params.empirical.PatternFormationParams attribute) RealityBranch (class in mercurial.branches.branch) Regularization (class in mercurial.utils.validation) RepetitionCounter (class in mercurial.impressions.dynamic_formation) reset() (mercurial.core.pattern_completion.HopfieldPatternCompletion method) (mercurial.impressions.dynamic_formation.DynamicImpressionFormation method) (mercurial.utils.overfitting_controls.EarlyStopping method) (mercurial.utils.validation.EarlyStopping method) resonance_threshold (mercurial.core.patterns.StabilityRegime attribute) (mercurial.StabilityRegime attribute) response() (mercurial.core.sensory_transduction.Photoreceptor method) retention_timescale (mercurial.impressions.material_memory.MaterialSpec attribute) rtol (mercurial.simulation.integrator.IntegrationConfig attribute) run() (mercurial.simulation.engine.SimulationEngine method) run_auditory_transduction() (mercurial.simulation.engine.SimulationEngine method) run_cicoria() (in module mercurial.atlas.cicoria_empirical) run_coupled_fields() (mercurial.simulation.engine.SimulationEngine method) run_cross_validation() (mercurial.utils.synthetic_data.OverfittingTest method)

run_dirac() (mercurial.simulation.engine.SimulationEngine method) run_enfield() (in module mercurial.atlas.enfield_poltergeist_empirical) run_fdtd() (mercurial.simulation.engine.SimulationEngine method) run_hopf() (mercurial.simulation.engine.SimulationEngine method) run_jansen_rit() (mercurial.simulation.engine.SimulationEngine method) run_klein_gordon() (mercurial.simulation.engine.SimulationEngine method) run_maria_shoe() (in module mercurial.atlas.maria_shoe_empirical) run_morton_ghost() (in module mercurial.atlas.morton_ghost_empirical) run_neural() (mercurial.simulation.engine.SimulationEngine method) run_neural_field() (mercurial.simulation.engine.SimulationEngine method) run_neural_with_kuramoto() (mercurial.simulation.engine.SimulationEngine method) run_pattern_completion() (mercurial.simulation.engine.SimulationEngine method) run_plastic_jr() (mercurial.simulation.engine.SimulationEngine method) run_plastic_wc() (mercurial.simulation.engine.SimulationEngine method) run_reynolds_nde() (in module mercurial.atlas.reynolds_nde_empirical) run_script() (mercurial.utils.launcher.ScriptLauncher method) run_sri_remote_viewing() (in module mercurial.atlas.sri_remote_viewing_empirical) run_thornton_road() (in module mercurial.atlas.thornton_road_empirical) run_visual_transduction() (mercurial.simulation.engine.SimulationEngine method) run_wilmot() (in module mercurial.atlas.wilmot_empirical)

S

ScriptLauncher (class in mercurial.utils.launcher) select_optimal_pathway() (mercurial.spectral.dpr_pathways.DPRPathwayOptimizer method) sequence_coherence() (mercurial.spectral.sequencing.TemporalSequencing method) set_alignment_from_levels() (mercurial.simulation.engine.SimulationEngine method) set_alignment_matrix() (mercurial.simulation.engine.SimulationEngine method) set_bifurcation() (mercurial.core.hopf.HopfOscillator method) set_external_inputs() (mercurial.core.patterns.NeuralPattern method) set_global_pattern() (mercurial.branches.branch.RealityBranch method) set_state_vector() (mercurial.branches.branch.RealityBranch method) shannon_entropy() (in module mercurial.core.entropy) show_scripts() (mercurial.utils.launcher.ScriptLauncher method) show_tip() (mercurial.utils.launcher.ToolTip method) sigma (mercurial.params.empirical.HopfParams attribute) sigma_e (mercurial.params.empirical.NeuralFieldParams attribute) (mercurial.params.empirical.WilsonCowanParams attribute) sigma_gray (mercurial.params.empirical.FDTDParams attribute) sigma_i (mercurial.params.empirical.NeuralFieldParams attribute) (mercurial.params.empirical.WilsonCowanParams attribute) sigma_white (mercurial.params.empirical.FDTDParams attribute) sigmoid() (mercurial.core.jansen_rit.JansenRitColumn method) (mercurial.core.pattern_completion.HopfieldPatternCompletion method) (mercurial.core.plasticity.PlasticJansenRit method) (mercurial.core.plasticity.PlasticWilsonCowan method) (mercurial.core.wilson_cowan.WilsonCowanPopulation method) similarity_to() (mercurial.branches.branch.RealityBranch method) simple_gaussian() (mercurial.core.patterns.Pattern class method) (mercurial.Pattern class method) simulate_branching() (mercurial.branches.formation.BranchFormationSimulator method) simulate_dpr_transfer() (mercurial.spectral.dpr_pathways.DPRPathwayOptimizer method) SimulationEngine (class in mercurial.simulation.engine) SobolSensitivity (class in mercurial.utils.sensitivity) sparsity_ratio() (in module mercurial.utils.overfitting_controls) squeezed_state_concurrence() (in module mercurial.core.entanglement) squeezing_r (mercurial.params.empirical.EntanglementParams attribute) squeezing_theta (mercurial.params.empirical.EntanglementParams attribute)

StabilityRegime (class in mercurial) (class in mercurial.core.patterns) StateVector (class in mercurial) (class in mercurial.core.state_space) stdp_ltd_rate (mercurial.params.empirical.HebbianParams attribute) stdp_ltp_rate (mercurial.params.empirical.HebbianParams attribute) stdp_tau_minus (mercurial.params.empirical.HebbianParams attribute) stdp_tau_plus (mercurial.params.empirical.HebbianParams attribute) steady_state() (mercurial.core.wilson_cowan.WilsonCowanPopulation method) step() (mercurial.core.coupled_fields.CoupledNeuralFields method) (mercurial.core.fdtd.FDTD2D method) (mercurial.core.hopf.HopfNetwork method) (mercurial.core.hopf.HopfOscillator method) (mercurial.core.jansen_rit.JansenRitColumn method) (mercurial.core.jansen_rit.JansenRitNetwork method) (mercurial.core.neural_field.NeuralField2D method) (mercurial.core.pattern_completion.HopfieldPatternCompletion method) (mercurial.core.plasticity.PlasticJansenRit method) (mercurial.core.plasticity.PlasticWilsonCowan method) (mercurial.core.qft_propagation.Dirac1D method) (mercurial.core.qft_propagation.KleinGordon2D method) (mercurial.core.sensory_transduction.AuditoryTransductionPipeline method) (mercurial.core.sensory_transduction.BipolarCell method) (mercurial.core.sensory_transduction.HairCell method) (mercurial.core.sensory_transduction.Photoreceptor method) (mercurial.core.sensory_transduction.VisualTransductionPipeline method) (mercurial.core.wilson_cowan.WilsonCowanPopulation method) (mercurial.utils.overfitting_controls.EarlyStopping method) (mercurial.utils.validation.EarlyStopping method) step_intensity() (in module mercurial.tests.enhancements.test_sensory_transduction) StochasticIntegrator (class in mercurial.simulation.integrator) store_patterns() (mercurial.core.pattern_completion.HopfieldPatternCompletion method) structural_similarity() (mercurial.branches.isomorphism.IsomorphismMapper method) symmetry_parameter (mercurial.branches.formation.BifurcationPoint attribute) SymmetryBreaking (class in mercurial.branches.formation) SyntheticDataGenerator (class in mercurial.utils.synthetic_data)

T

T_eff (mercurial.params.empirical.ThermodynamicParams attribute) TACTILE (mercurial.spectral.modalities.Modality attribute) (mercurial.spectral.quantum_fields.ModalityField attribute) tau_a (mercurial.params.empirical.PatternCompletionParams attribute) tau_e (mercurial.params.empirical.WilsonCowanParams attribute) tau_fast (mercurial.params.empirical.HairCellParams attribute) tau_i (mercurial.params.empirical.WilsonCowanParams attribute) tau_p (mercurial.params.empirical.PhotoreceptorParams attribute) tau_slow (mercurial.params.empirical.HairCellParams attribute) TEMPORAL_ALIGNMENT (mercurial.spectral.dpr_pathways.DPRPathway attribute) TemporalSequencing (class in mercurial.spectral.sequencing) thermal_nbar (mercurial.params.empirical.EntanglementParams attribute) THERMOCEPTIVE (mercurial.spectral.modalities.Modality attribute) (mercurial.spectral.quantum_fields.ModalityField attribute)

thermodynamic_entropy() (in module mercurial.core.entropy) ThermodynamicParams (class in mercurial.params.empirical) theta_branch (mercurial.params.empirical.DecoherenceParams attribute) THRESHOLDS (mercurial.hierarchy.levels.LadderHierarchy attribute) time (mercurial.branches.alignment.AlignmentEvent attribute) (mercurial.branches.formation.BifurcationPoint attribute) tissue_type (mercurial.params.empirical.FDTDParams attribute) tone_burst() (in module mercurial.tests.enhancements.test_sensory_transduction) ToolTip (class in mercurial.utils.launcher) TopDownBiasing (class in mercurial.consciousness.biasing) total_energy() (mercurial.core.thermodynamics.InternalEnergy class method) train() (mercurial.utils.overfitting_controls.LinearModel method) train_test_split() (mercurial.utils.synthetic_data.OverfittingTest method)

U

underfitting_detection() (in module mercurial.utils.validation) UnifiedField (class in mercurial.spectral.quantum_fields) update() (mercurial.core.kuramoto.KuramotoNetwork method) (mercurial.core.kuramoto.KuramotoOscillator method) (mercurial.core.thermodynamics.EffectiveTemperature method) (mercurial.impressions.dynamic_formation.AttentionFocus method) (mercurial.impressions.dynamic_formation.DynamicImpressionFormation method) (mercurial.impressions.dynamic_formation.EmotionalSalience method) (mercurial.impressions.dynamic_formation.RepetitionCounter method)

update_all() (mercurial.impressions.material_memory.CompositeMaterial method) update_consciousness_from_reality() (mercurial.consciousness.perception.VariationalPerception method) update_field_evolution() (mercurial.spectral.modalities.ModalityEnergyHierarchy method) update_impression() (mercurial.core.patterns.Pattern method) (mercurial.impressions.material_memory.MaterialMemory method) (mercurial.Pattern method)

V

v0 (mercurial.params.empirical.JansenRitParams attribute) validate() (mercurial.utils.validation.CrossValidator method) VariationalPerception (class in mercurial.consciousness.perception) VESTIBULAR (mercurial.spectral.modalities.Modality attribute) (mercurial.spectral.quantum_fields.ModalityField attribute)

violation_norm() (mercurial.Constraints method) (mercurial.core.patterns.Constraints method) VISUAL (mercurial.spectral.modalities.Modality attribute) (mercurial.spectral.quantum_fields.ModalityField attribute) visual_stimulus() (in module mercurial.tests.enhancements.test_coupled_fields) VisualTransductionPipeline (class in mercurial.core.sensory_transduction)

W

w_ee (mercurial.params.empirical.WilsonCowanParams attribute) w_ei (mercurial.params.empirical.WilsonCowanParams attribute) w_ie (mercurial.params.empirical.WilsonCowanParams attribute) w_ii (mercurial.params.empirical.WilsonCowanParams attribute)

WATER (mercurial.impressions.material_memory.Material attribute) WilsonCowanParams (class in mercurial.params.empirical) WilsonCowanPopulation (class in mercurial.core.wilson_cowan) WOOD (mercurial.impressions.material_memory.Material attribute)

X

x0 (mercurial.params.empirical.HairCellParams attribute)

Z

z (mercurial.params.empirical.HairCellParams attribute)